Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906394.1_cds_XP_016456572.1_50393
CDS Infomation

[gene=LOC107780531] [db_xref=GeneID:107780531] [protein=calcium-dependent protein kinase 24-like] [frame=3] [partial=5'] [protein_id=XP_016456572.1] [location=complement(join(37036..37182,37282..37515,37604..37771,37896..38011,38172..38324,38487..38630,38924..39047,39698..>40107))] [gbkey=CDS]
Sequence

CTTGTATGTATTTTTACAAACAATACGTTGCGTCTTGGTTTATGTGATTCTATTTCTTCT
AACAGGTACGAGTTTGGGAAGGAATTAGGAAGAGGAGAGTTTGGGATAACATACCAATGT
GTAGACAAGGAAAGTGGAGAGAATGTGGCATGTAAGACAATAGCAAAGAGCAAGTTGAGG
ACAGAGATAGATGTGGAGGATGTGAGGAGGGAGGTGGTAATAATGAGGCATTTGCCTAAA
CACCCTAATATTGTTAGCTATAAGGAAGTTTACGAAGATAAAGAGGCTGTTTATCTTGTT
ATGGAACTTTGTGAAGGTGGTGAACTCTTTGATAGAATTGTTGCTAGAGGACATTATACC
GAAAGAGCTGCTGCTCGTGTTACCAAGACTATTCTTGAGGTTGTCCAGGTATGCCACAAG
CATGGCGTAATTCATAGAGACCTTAAACCTGAGAATTTTTTGTATGCCAATACAAGTGAA
AATGCTCAGTTGAAGGCCATTGACTTTGGCCTTTCTATTTTCTTTGAGCCTGGTCAGAGA
TTTGGTGAAATAGTTGGAAGCCCATATTACATGGCTCCAGAAGTTCTTAGAAGAAATTAT
GGACCAGAAGTAGATGTGTGGAGTGCCGGTGTTATTCTTTACATTTTGTTATGTGGCGTT
CCCCCTTTTTGGGCAGAAACCGAAGAAGGAATTGCACACGCAATAGTAAAAGGTACAATA
GATTTTAACAGAGATCCTTGGCCAAGAGTATCAGATGAAGCTAAGGACCTTGTCAAAGGA
ATGCTTGATCCAAATCCTTATAATAGGCTGACAGTTGAAGAAGTCCTTGAACATCACTGG
ATACAGAATGCTGAGAAGGTCTCTAATGTATGTTTGGGAGAAGGTGTGAGAGCGAGGATT
AAGCAATTCACTTTGATGAATAAATTCAAGAAAAAAGTTCTTAGAGTTGTAGCAGATAAC
TTACCACAAGATCAAGTTCATGGAATTAAACAAATGTTCTATATGATGGACAGTGACAAA
AATGGAAACCTAAGCTTCCAAGAACTCAAAGATGGTCTACATATGATGGGGCAATCTGTT
GCTGATCCTGAAGTCCAATTGCTAATGGATGCTGCTGATGTAGATGGAAATGGGATGCTA
AACTGTGAAGAATTTGTGACAATGGCTGTACACTTACAGAGGTTAAGCAACGACGATCAT
CTCCGCCAAGCTTTCCTTCAATTTGACAAGAATCGAAGTGGATATATTGAGTTTGAAGAT
TTGAAAGTTTCTTTGTTTGATGATCATCTTGGCCCCAAGAATGATCAAGCGATCCACGAC
ATCATATCTGATGCTGATTTGGATAAGGATGGAAGGATAAGTTACCAAGATTTCAAAGTC
ATGATGTCAACAGGAATGGATTGGAAGATGGGTTCACGCCAATACTCAAAAGCAATGCTA
AATGCACTCAGCATGAGACTTTTCAAAGACAAATCCATCCAACTGAAAAATTAA

Peptide Sequence

PEP ID

XP_016456572.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 24-like, partial [Nicotiana tabacum]
Sequence

LVCIFTNNTLRLGLCDSISSNRYEFGKELGRGEFGITYQCVDKESGENVACKTIAKSKLR
TEIDVEDVRREVVIMRHLPKHPNIVSYKEVYEDKEAVYLVMELCEGGELFDRIVARGHYT
ERAAARVTKTILEVVQVCHKHGVIHRDLKPENFLYANTSENAQLKAIDFGLSIFFEPGQR
FGEIVGSPYYMAPEVLRRNYGPEVDVWSAGVILYILLCGVPPFWAETEEGIAHAIVKGTI
DFNRDPWPRVSDEAKDLVKGMLDPNPYNRLTVEEVLEHHWIQNAEKVSNVCLGEGVRARI
KQFTLMNKFKKKVLRVVADNLPQDQVHGIKQMFYMMDSDKNGNLSFQELKDGLHMMGQSV
ADPEVQLLMDAADVDGNGMLNCEEFVTMAVHLQRLSNDDHLRQAFLQFDKNRSGYIEFED
LKVSLFDDHLGPKNDQAIHDIISDADLDKDGRISYQDFKVMMSTGMDWKMGSRQYSKAML
NALSMRLFKDKSIQLKN

Transcript Sequence

Gene sequence data has not been registered.